STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc10-2Trafficking protein particle complex subunit 10. (664 aa)    
Predicted Functional Partners:
PPL_01253
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.977
PPL_02219
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.977
trappc3
Trafficking protein particle complex subunit 3.
    
 0.976
PPL_07181
Histidine kinase DhkG.
   
 0.969
trappc2l
Trafficking protein particle complex subunit 2-like protein.
    
 0.967
trappc2
Trafficking protein particle complex subunit 2.
    
 0.965
PPL_10437
Uncharacterized protein.
    
 0.960
PPL_08125
Uncharacterized protein.
    
 0.858
PPL_04664
TPR_REGION domain-containing protein.
    
 0.784
PPL_02988
DUF1683 family protein.
     
 0.772
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.