STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps1740S ribosomal protein S17. (124 aa)    
Predicted Functional Partners:
rpl26
S60 ribosomal protein L26.
   
 
 0.999
rpl13
S60 ribosomal protein L13.
   
 
 0.999
rps11
40S ribosomal protein S11.
   
 0.999
rplP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 
 0.999
rps5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 0.999
rpl31
S60 ribosomal protein L31.
  
 
 0.999
rpl30
S60 ribosomal protein L30.
   
 
 0.999
PPL_01637
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.999
rps18
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
rps30-2
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.