Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PPL_00785 | PPL_08725 | D3AXF4 | D3BJJ8 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | M20_dimer domain-containing protein. | 0.557 |
PPL_00785 | argC | D3AXF4 | D3BGC4 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | Acetylglutamate kinase. | 0.999 |
PPL_00785 | oatA | D3AXF4 | D3B161 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | Ornithine aminotransferase. | 0.932 |
PPL_00785 | pyr1-3 | D3AXF4 | D3BB35 | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | Dihydroorotase. | 0.935 |
PPL_08725 | PPL_00785 | D3BJJ8 | D3AXF4 | M20_dimer domain-containing protein. | Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate. | 0.557 |
PPL_08725 | PPL_12118 | D3BJJ8 | D3BLR5 | M20_dimer domain-containing protein. | Uncharacterized protein. | 0.554 |
PPL_08725 | allB2 | D3BJJ8 | D3BLP5 | M20_dimer domain-containing protein. | Allantoinase. | 0.575 |
PPL_08725 | argC | D3BJJ8 | D3BGC4 | M20_dimer domain-containing protein. | Acetylglutamate kinase. | 0.981 |
PPL_08725 | oatA | D3BJJ8 | D3B161 | M20_dimer domain-containing protein. | Ornithine aminotransferase. | 0.529 |
PPL_08725 | pyd1 | D3BJJ8 | D3B847 | M20_dimer domain-containing protein. | Dihydropyrimidine dehydrogenase. | 0.571 |
PPL_08725 | pyd2 | D3BJJ8 | D3AZB8 | M20_dimer domain-containing protein. | Dihydropyrimidinase. | 0.575 |
PPL_08725 | pyr1-3 | D3BJJ8 | D3BB35 | M20_dimer domain-containing protein. | Dihydroorotase. | 0.575 |
PPL_08725 | pyr4 | D3BJJ8 | D3B8X3 | M20_dimer domain-containing protein. | Dihydroorotate oxidase. | 0.571 |
PPL_08725 | serC | D3BJJ8 | D3AY60 | M20_dimer domain-containing protein. | Phosphoserine aminotransferase. | 0.537 |
PPL_12118 | PPL_08725 | D3BLR5 | D3BJJ8 | Uncharacterized protein. | M20_dimer domain-containing protein. | 0.554 |
allB2 | PPL_08725 | D3BLP5 | D3BJJ8 | Allantoinase. | M20_dimer domain-containing protein. | 0.575 |
allB2 | argC | D3BLP5 | D3BGC4 | Allantoinase. | Acetylglutamate kinase. | 0.438 |
allB2 | pyd1 | D3BLP5 | D3B847 | Allantoinase. | Dihydropyrimidine dehydrogenase. | 0.886 |
allB2 | pyr1-3 | D3BLP5 | D3BB35 | Allantoinase. | Dihydroorotase. | 0.958 |
allB2 | pyr4 | D3BLP5 | D3B8X3 | Allantoinase. | Dihydroorotate oxidase. | 0.872 |
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