STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_08725M20_dimer domain-containing protein. (467 aa)    
Predicted Functional Partners:
argC
Acetylglutamate kinase.
  
 0.981
pyd2
Dihydropyrimidinase.
  
 
 0.575
pyr1-3
Dihydroorotase.
   
 0.575
allB2
Allantoinase.
  
 
 0.575
pyd1
Dihydropyrimidine dehydrogenase.
  
 0.571
pyr4
Dihydroorotate oxidase.
  
 0.571
PPL_00785
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.
     
 0.557
PPL_12118
Uncharacterized protein.
    
 0.554
serC
Phosphoserine aminotransferase.
    
 0.537
oatA
Ornithine aminotransferase.
  
 
 0.529
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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