STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_08994Glyco_hydro_cc domain-containing protein. (323 aa)    
Predicted Functional Partners:
PPL_00232
Fes1 domain-containing protein.
   
 0.555
rpl10
S60 ribosomal protein L10.
   
 0.555
psmG1
Proteasome assembly chaperone 1.
   
 
 0.479
PPL_11764
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
    
 
 0.462
mrpl33
Ribosomal protein L33, mitochondrial.
    
   0.456
PPL_02379
S5 DRBM domain-containing protein.
    
   0.456
PPL_07146
L51_S25_CI-B8 domain-containing protein.
    
   0.456
PPL_07986
Uncharacterized protein.
    
   0.456
PPL_08688
Uncharacterized protein.
    
   0.456
PPL_12436
Uncharacterized protein.
    
   0.456
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.