STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_09303Uncharacterized protein. (1055 aa)    
Predicted Functional Partners:
ufm1
Ubiquitin-fold modifier 1; Ubiquitin-like modifier.
    
 
 0.966
PPL_03415
Uncharacterized protein.
  
  
 0.670
PPL_05723
Uncharacterized protein.
  
 
 
 0.668
ufc1
Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.
   
  
 0.600
uba5
UBA/THIF-type NAD/FAD binding fold-containing protein.
      
 0.593
PPL_07981
Uncharacterized protein.
   
 
 0.586
PPL_07770
DUF733 family protein.
   
  
 0.484
PPL_07241
zf-C2HC5 domain-containing protein.
      
 0.483
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.