STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_09745VWFA domain-containing protein. (717 aa)    
Predicted Functional Partners:
PPL_02606
Uncharacterized protein.
    
 0.919
PPL_05758
WD_REPEATS_REGION domain-containing protein.
    
 0.743
PPL_11791
WD40 repeat-containing protein.
    
 0.743
PPL_02002
TFIID_20kDa domain-containing protein.
    
 0.605
tra1
Protein kinase; Belongs to the PI3/PI4-kinase family.
    
  0.597
taf9
Transcription initiation factor TFIID subunit.
    
  0.595
PPL_05242
Uncharacterized protein.
    
  0.566
wdr18
WD40 repeat-containing protein.
    
 0.550
tubB
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.544
taf6
TATA-binding protein-associated-factor.
    
 0.538
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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