STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_09946Rho-GAP domain-containing protein. (152 aa)    
Predicted Functional Partners:
gacZ
MYND-type zinc finger-containing protein.
     
0.577
uprt
Uracil phosphoribosyltransferase.
    
  0.477
udkC
Adenylate cyclase domain-containing protein.
    
  0.477
udkB
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
  0.477
udkD
Adenylate cyclase domain-containing protein.
    
  0.477
udkA
Uridine kinase.
    
  0.477
gacD
RhoGAP domain-containing protein.
  
  
 0.475
racE
Rho GTPase.
 
  
 0.465
PPL_00360
Leucine-rich repeat-containing protein.
    
 0.465
PPL_00672
Uncharacterized protein.
 
  
 0.465
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.