STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DD8-14Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
PPL_05737
Ubiquitin-like domain-containing protein.
    
  0.655
PPL_00762
Putative ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.523
ubc9
Putative E2 enzyme Ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.523
PPL_07513
RING-type domain-containing protein.
    
 0.482
PPL_04603
Ubiquitin-conjugating BIR-domain enzyme apollon.
    
 0.477
PPL_00617
Ubiquitin-protein ligase domain-containing protein.
    
 0.464
rps30-2
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.454
ddx41
DEAD/DEAH box helicase.
    
 0.451
regA
Phosphodiesterase.
    
 0.450
pde3
cGMP-specific phosphodiesterase; Belongs to the cyclic nucleotide phosphodiesterase family.
    
 0.450
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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