STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pccBPropionyl-CoA carboxylase. (875 aa)    
Predicted Functional Partners:
pccA
Propionyl-CoA carboxylase.
 
 0.999
mccA
Methylcrotonyl-CoA carboxylase.
 
 0.994
bkdC
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 
 0.966
PPL_07027
Putative acetyl-CoA synthetase.
  
 0.956
PPL_03367
Methylmalonyl-CoA epimerase.
  
 
 0.955
mmsdh
Methylmalonate-semialdehyde dehydrogenase.
   
 0.951
PPL_11603
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.950
PPL_11491
TH1 family protein.
  
 0.947
acsA
Acetyl-coenzyme A synthetase.
  
 0.946
PPL_12304
Putative acyl-CoA oxidase.
  
 
 0.936
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.