Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PPL_10403 | PPL_11552 | D3BR00 | D3BVG1 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Peptide methionine sulfoxide reductase. | 0.571 |
PPL_10403 | grxA | D3BR00 | D3BVM5 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Glutaredoxin. | 0.623 |
PPL_10403 | gsr | D3BR00 | D3BD10 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.731 |
PPL_10403 | lpd | D3BR00 | D3BDF9 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Dihydrolipoyl dehydrogenase. | 0.661 |
PPL_10403 | prdx5 | D3BR00 | D3BUP0 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.754 |
PPL_10403 | rnrA | D3BR00 | D3BIF3 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.465 |
PPL_10403 | trrA | D3BR00 | D3BQ30 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Thioredoxin reductase. | 0.516 |
PPL_11552 | PPL_10403 | D3BVG1 | D3BR00 | Peptide methionine sulfoxide reductase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.571 |
PPL_11552 | grxA | D3BVG1 | D3BVM5 | Peptide methionine sulfoxide reductase. | Glutaredoxin. | 0.823 |
PPL_11552 | gsr | D3BVG1 | D3BD10 | Peptide methionine sulfoxide reductase. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.523 |
PPL_11552 | lpd | D3BVG1 | D3BDF9 | Peptide methionine sulfoxide reductase. | Dihydrolipoyl dehydrogenase. | 0.523 |
PPL_11552 | prdx5 | D3BVG1 | D3BUP0 | Peptide methionine sulfoxide reductase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.414 |
PPL_11552 | trrA | D3BVG1 | D3BQ30 | Peptide methionine sulfoxide reductase. | Thioredoxin reductase. | 0.687 |
acp1 | grxA | D3B3P7 | D3BVM5 | Acid phosphatase 1. | Glutaredoxin. | 0.752 |
acp1 | gsr | D3B3P7 | D3BD10 | Acid phosphatase 1. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.673 |
acp1 | lpd | D3B3P7 | D3BDF9 | Acid phosphatase 1. | Dihydrolipoyl dehydrogenase. | 0.673 |
acp1 | trrA | D3B3P7 | D3BQ30 | Acid phosphatase 1. | Thioredoxin reductase. | 0.633 |
grxA | PPL_10403 | D3BVM5 | D3BR00 | Glutaredoxin. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.623 |
grxA | PPL_11552 | D3BVM5 | D3BVG1 | Glutaredoxin. | Peptide methionine sulfoxide reductase. | 0.823 |
grxA | acp1 | D3BVM5 | D3B3P7 | Glutaredoxin. | Acid phosphatase 1. | 0.752 |
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