STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE61257.1Transcriptional regulator, LacI family. (342 aa)    
Predicted Functional Partners:
SDF69493.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.771
SDE79407.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.748
SDG04230.1
Glutamate synthase (ferredoxin).
    
 
 0.732
SDE81909.1
Transcriptional regulator, GntR family.
  
     0.721
SDE70279.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
    
 0.683
SDF95448.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
    
 0.683
SDE61283.1
Alcohol dehydrogenase GroES-like domain-containing protein.
   
   0.660
SDE61228.1
ATPase components of ABC transporters with duplicated ATPase domains.
  
   0.622
SDG48456.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
   0.618
SDF80973.1
PTS system, fructose-specific IIC component.
     
 0.440
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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