STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE63455.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (286 aa)    
Predicted Functional Partners:
SDE63480.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  0.988
SDE63429.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.951
SDG41824.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.903
SDG38560.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.887
SDE98102.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.884
SDF27425.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.880
SDG50461.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.880
SDF97169.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.877
SDG31474.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.877
SDF74530.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.875
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.