STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE68258.1Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. (417 aa)    
Predicted Functional Partners:
SDG19814.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.962
SDG42784.1
Glycine/D-amino acid oxidase.
   
 0.927
SDF42771.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
   
 0.915
SDF19704.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.910
SDG00541.1
Amino acid adenylation domain-containing protein.
  
 0.910
SDG00933.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
  
 0.910
SDG00574.1
Phosphopantetheine attachment site.
  
 0.910
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.855
SDF42716.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
    
 0.813
SDF42742.1
Menaquinol-cytochrome c reductase cytochrome b subunit.
    
 0.813
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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