STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE58518.1ABC-2 type transport system ATP-binding protein. (307 aa)    
Predicted Functional Partners:
SDE58564.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
     0.868
SDE58541.1
ABC-2 type transport system permease protein.
       0.823
SDF79396.1
Bacitracin transport system ATP-binding protein.
 
   
0.818
SDE58491.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
     0.721
SDG04134.1
ABC-2 type transport system permease protein.
 
  0.688
SDF52235.1
ABC-2 type transport system permease protein.
 
  0.638
SDG36730.1
Bacitracin transport system permease protein.
 
 
  0.565
SDG56584.1
ABC-2 type transport system permease protein.
 
  0.564
SDG41824.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
   
 
0.561
SDE90929.1
ABC-2 type transport system permease protein.
 
  0.555
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.