STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE80083.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (549 aa)    
Predicted Functional Partners:
SDE80029.1
Aldotetraouronic acid ABC transporter membrane protein 2.
 
 0.945
SDE80061.1
Putative aldouronate transport system permease protein.
 
 
 0.941
SDF69096.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
  
 0.867
SDG28049.1
Putative aldouronate transport system permease protein.
 
 
 0.853
SDF69032.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 
 0.848
SDF69066.1
Putative aldouronate transport system permease protein.
 
 0.842
SDG28022.1
Putative aldouronate transport system permease protein.
 
 0.810
SDF70667.1
Putative aldouronate transport system permease protein.
  
 
  0.772
SDF62508.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.763
SDE80135.1
Two-component system, sensor histidine kinase YesM.
 
     0.755
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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