STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE88681.1Pyruvate dehydrogenase E1 component beta subunit. (325 aa)    
Predicted Functional Partners:
SDE88654.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.999
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).
 0.999
SDE88624.1
Dihydrolipoamide dehydrogenase.
 0.997
SDF69632.1
Pyruvate dehydrogenase E1 component alpha subunit.
 0.997
SDF69708.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 0.997
SDG06638.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
 0.997
SDF69735.1
Dihydrolipoamide dehydrogenase.
 0.985
SDG06584.1
Branched-chain alpha-keto acid dehydrogenase E2 component.
 0.985
SDG06664.1
Dihydrolipoamide dehydrogenase.
 0.984
SDG08610.1
Formate C-acetyltransferase.
   
 
 0.902
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.