STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE97579.1LysM domain-containing protein. (332 aa)    
Predicted Functional Partners:
SDG00960.1
CAAX protease self-immunity.
  
     0.720
SDF19446.1
S-layer homology domain-containing protein.
  
     0.707
SDG23087.1
Spore germination protein.
 
  
 0.603
SDG16901.1
Transcriptional regulator, AbrB family.
  
     0.593
SDE65423.1
Stage V sporulation protein AD.
  
  
 0.566
gpr
GPR endopeptidase Aspartic peptidase. MEROPS family A25; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.537
SDE59814.1
Ca-activated chloride channel family protein.
  
     0.532
SDE79741.1
Spore germination protein KB.
  
    0.523
SDG07478.1
Stage III sporulation protein AA.
  
     0.497
SDF14593.1
Small, acid-soluble spore protein, alpha/beta type.
  
    0.495
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.