STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF41802.1Hypothetical protein. (366 aa)    
Predicted Functional Partners:
SDF41864.1
RNA polymerase sigma factor, sigma-70 family.
 
     0.957
SDF41831.1
Hypothetical protein.
  
    0.891
SDG14948.1
Hypothetical protein.
  
     0.622
SDF41768.1
Membrane protein DedA, SNARE-associated domain.
       0.596
uppP-2
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.536
SDG10756.1
Hypothetical protein.
  
     0.527
SDF15649.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
 
    0.490
SDG10722.1
Energy-coupling factor transport system permease protein.
  
     0.485
SDG31601.1
Hypothetical protein.
  
     0.458
SDG48024.1
DUF4097 and DUF4098 domain-containing protein YvlB.
 
    0.447
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.