STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF57707.1Copper amine oxidase N-terminal domain-containing protein. (472 aa)    
Predicted Functional Partners:
SDF21803.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
 0.963
SDF21685.1
Type IV pilus assembly protein PilB.
  
 0.961
SDF21593.1
Type IV pilus assembly protein PilA.
  
 
 0.951
SDF21623.1
Type IV pilus assembly protein PilC.
  
  
 0.931
SDF57681.1
D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.
 
     0.845
SDF87014.1
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein).
   
  
 0.816
SDF21561.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
  
  
 0.741
SDE80792.1
Competence protein ComEC.
  
  
 0.724
SDE80839.1
Competence protein ComEA.
  
  
 0.713
SDE87091.1
Protoporphyrinogen oxidase.
  
     0.709
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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