STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF59323.1Response regulator NasT. (204 aa)    
Predicted Functional Partners:
SDG44338.1
Urea-binding protein.
  
 
 0.891
SDF07812.1
Copper amine oxidase N-terminal domain-containing protein.
  
 
 0.876
SDF59368.1
Anthranilate phosphoribosyltransferase.
 
     0.847
SDF26187.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.759
nifH
Fe-only nitrogenase iron protein subunit AnfH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.720
nifH-2
Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.720
SDE60105.1
Nitrite reductase (NADH) large subunit.
 
  
 0.673
SDF59294.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.673
SDG08853.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.659
SDG08540.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.606
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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