STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF59518.1MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor. (147 aa)    
Predicted Functional Partners:
SDE70279.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
   
 
 0.722
SDF95448.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
   
 
 0.722
SDF59487.1
Putative oxidoreductase.
 
     0.609
SDF59431.1
Phospholipase/carboxylesterase.
       0.563
SDF59457.1
Putative NAD(P)H nitroreductase.
  
 
  0.560
SDF59547.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
    
  0.491
SDF46808.1
PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family.
     
 0.466
SDF68638.1
PTS system, D-glucosamine-specific IIC component.
     
 0.466
SDF90809.1
DNA-binding transcriptional regulator, MarR family.
  
     0.457
SDF52124.1
Glyoxalase family protein.
    
  0.453
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.