STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF79236.1Diguanylate cyclase (GGDEF) domain-containing protein. (530 aa)    
Predicted Functional Partners:
SDG57697.1
HDIG domain-containing protein.
 0.983
SDG24236.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.982
SDF70375.1
HDIG domain-containing protein.
 
  0.962
SDF82980.1
Two-component system, OmpR family, response regulator MprA.
 
 
 
  0.904
SDE63781.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 
 
  0.900
SDE97738.1
Predicted ATPase.
   
 0.897
SDG19365.1
HAMP domain-containing protein.
 0.897
SDE96574.1
Two component transcriptional regulator, winged helix family.
 
 
 
  0.834
SDF60276.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.781
SDF50826.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.777
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.