STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF90679.1Lipoate-protein ligase. (334 aa)    
Predicted Functional Partners:
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
 
 0.992
gcvH
Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.
 
 
 0.985
lipB
Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
   
 0.923
SDE88624.1
Dihydrolipoamide dehydrogenase.
 
 
 0.891
SDE88654.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 0.888
SDG01061.1
Surfactin synthase thioesterase subunit.
     
 0.871
SDF69735.1
Dihydrolipoamide dehydrogenase.
 
 
 0.866
SDF19704.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
    
 0.863
SDG00541.1
Amino acid adenylation domain-containing protein.
    
 0.863
SDG00933.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
    
 0.863
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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