STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF94887.1Protein of unknown function. (99 aa)    
Predicted Functional Partners:
SDF94829.1
Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.946
SDF94800.1
Uncharacterized protein, UPF0297 family; Belongs to the UPF0297 family.
  
  
 0.912
SDF94856.1
Uncharacterized protein YrzB, UPF0473 family; Belongs to the UPF0473 family.
       0.855
mltG
UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
       0.711
SDF94949.1
Putative protease.
       0.657
SDF94976.1
Putative protease.
       0.542
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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