STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF96885.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
SDF96902.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.727
SDF96956.1
Ornithine cyclodeaminase/mu-crystallin family protein.
     
 0.690
SDF96929.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.653
SDF96976.1
Peptide/nickel transport system permease protein.
       0.646
SDG43051.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
    
 0.631
SDF96998.1
Peptide/nickel transport system permease protein.
       0.606
SDF97015.1
Peptide/nickel transport system substrate-binding protein.
       0.490
SDE62729.1
AraC-like ligand binding domain-containing protein.
  
 
  0.488
SDE98677.1
AraC-type DNA-binding protein.
  
 
  0.488
SDF84438.1
Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin).
  
  
 0.483
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.