STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF97998.1Putative amidase domain-containing protein. (335 aa)    
Predicted Functional Partners:
SDF97885.1
UV-damage endonuclease.
 
     0.778
SDF71196.1
Protein YqhG of unknown function.
  
     0.773
SDG14825.1
Spore germination protein D.
  
     0.771
SDE77571.1
Prespore-specific regulator.
  
     0.769
SDG16821.1
Protein of unknown function.
  
     0.769
SDF75202.1
Outer membrane lipoprotein-sorting protein.
  
     0.766
SDE90007.1
Spore coat protein E.
  
    0.758
SDG44982.1
Heptaprenyl diphosphate synthase.
  
     0.738
SDF97919.1
Hypothetical protein.
       0.737
SDG17215.1
Stage II sporulation protein E.
  
     0.730
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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