STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF99540.1Putative ABC transport system ATP-binding protein. (229 aa)    
Predicted Functional Partners:
SDF99522.1
Putative ABC transport system permease protein.
 0.999
SDG50981.1
Putative ABC transport system permease protein.
  
 0.968
SDF59751.1
Putative ABC transport system permease protein.
  
 0.963
SDF99574.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.960
SDF55211.1
ABC transporter.
 
    
0.803
SDE64117.1
Putative ABC transport system permease protein.
  
 0.798
SDF99603.1
Yip1 domain-containing protein.
  
    0.721
SDG58877.1
ATP-binding cassette, subfamily B.
 
    
0.668
SDE76109.1
Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.638
SDF75708.1
Putative ABC transport system permease protein.
 
  0.624
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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