STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG36757.1Phage shock protein PspC (stress-responsive transcriptional regulator). (55 aa)    
Predicted Functional Partners:
SDG34739.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
  
     0.754
SDF15683.1
Phage shock protein A (PspA) family protein.
  
 
 0.751
SDF15620.1
Phage shock protein A (PspA) family protein.
  
 
 0.743
SDF40948.1
Phage shock protein A (PspA) family protein.
  
 
 0.743
SDG26553.1
Phage shock protein A (PspA) family protein.
  
 
 0.743
SDG34767.1
Phage shock protein A (PspA) family protein.
  
 
 0.742
SDF83913.1
4 TMS phage holin, superfamily IV.
  
    0.741
SDF15649.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
  
     0.689
SDE95528.1
Signal transduction histidine kinase.
   
 
 0.671
SDG56638.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  
 0.511
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.