STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG37951.1Peptide/nickel transport system permease protein. (306 aa)    
Predicted Functional Partners:
SDG38054.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
 
 0.994
SDG39809.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.992
SDE77415.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.991
SDE77397.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.990
SDF54998.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.990
SDF62768.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.990
SDG38020.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.990
SDF54964.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.989
SDF96929.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.987
SDF96902.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.986
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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