STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG49272.1Protein of unknown function. (136 aa)    
Predicted Functional Partners:
SDE99182.1
DNA-binding transcriptional regulator, PadR family.
 
     0.668
SDF63371.1
ABC-2 family transporter protein.
  
     0.626
SDG25382.1
Acetyltransferase (GNAT) family protein.
  
     0.619
SDE66555.1
Ribosomal protein S18 acetylase RimI.
  
     0.596
SDF25630.1
DNA-binding transcriptional regulator, MerR family.
  
     0.557
SDF20536.1
DNA-binding transcriptional regulator, MerR family.
  
     0.524
SDF53001.1
Putative ABC transport system permease protein.
  
     0.456
SDF84126.1
Putative zinc ribbon domain-containing protein.
  
     0.448
SDF53073.1
Hypothetical protein.
  
     0.446
SDE93389.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.