Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG51104.1 | SDG51135.1 | SAMN04488542_1517 | SAMN04488542_1518 | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.682 |
SDG51104.1 | SDG51168.1 | SAMN04488542_1517 | SAMN04488542_1519 | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | Hypothetical protein. | 0.424 |
SDG51104.1 | proA | SAMN04488542_1517 | SAMN04488542_110109 | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.630 |
SDG51135.1 | SDG51104.1 | SAMN04488542_1518 | SAMN04488542_1517 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.682 |
SDG51135.1 | SDG51168.1 | SAMN04488542_1518 | SAMN04488542_1519 | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | Hypothetical protein. | 0.531 |
SDG51168.1 | SDG51104.1 | SAMN04488542_1519 | SAMN04488542_1517 | Hypothetical protein. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.424 |
SDG51168.1 | SDG51135.1 | SAMN04488542_1519 | SAMN04488542_1518 | Hypothetical protein. | Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. | 0.531 |
proA | SDG51104.1 | SAMN04488542_110109 | SAMN04488542_1517 | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | Sugar fermentation stimulation protein A; Belongs to the SfsA family. | 0.630 |