STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG58225.1Spermidine/putrescine transport system substrate-binding protein. (347 aa)    
Predicted Functional Partners:
SDG58255.1
Spermidine/putrescine transport system permease protein.
 
 0.999
SDG58282.1
Spermidine/putrescine transport system permease protein.
  
  0.996
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.991
SDF20207.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.980
SDG53454.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.978
SDG53398.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.971
SDG53427.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.952
SDF90537.1
Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
  
  0.767
SDG41824.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.766
SDE78657.1
Exonuclease SbcC.
    
 0.544
Your Current Organism:
Fontibacillus panacisegetis
NCBI taxonomy Id: 670482
Other names: CECT 7605, DSM 28129, F. panacisegetis, Fontibacillus panacisegetis Lee et al. 2011, KCTC 13564, Paenibacillus sp. KCTC 13564, strain P11-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.