STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR35480.1COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: tth:TTC0582 omega-(3) fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase; PFAM: Fatty acid desaturase. (355 aa)    
Predicted Functional Partners:
ADR35477.1
KEGG: tbd:Tbd_2650 carboxysome structural protein CsoS2; SPTR: Carboxysome structural protein CsoS2.
       0.551
ADR35478.1
Hypothetical protein; KEGG: pap:PSPA7_3900 cation-transporting ATPase Pma1; SPTR: Cation-transporting ATPase Pma1.
       0.551
ADR35479.1
KEGG: ske:Sked_34040 protein of unknown function (DUF1469); SPTR: Putative uncharacterized protein.
       0.551
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.