STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR35640.1Membrane protein of unknown function; COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: msv:Mesil_0099 membrane protein of unknown function; PFAM: membrane protein of unknown function; SPTR: Putative uncharacterized protein; PFAM: Membrane protein of unknown function. (120 aa)    
Predicted Functional Partners:
ADR36482.1
PspC domain protein; InterPro IPR007168; KEGG: ton:TON_1287 transcription regulator; PFAM: PspC domain protein; SPTR: Transcription regulator, PspC family; PFAM: PspC domain.
  
    0.830
ADR35641.1
KEGG: ttj:TTHB040 hypothetical protein; SPTR: Hypothetical conserved protein.
       0.773
ADR35642.1
KEGG: msv:Mesil_0260 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.736
ADR35638.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: mrb:Mrub_0256 heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Heme exporter protein CcmA; PFAM: ABC transporter.
  
    0.565
ADR35637.1
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525: IPR013526: IPR000412; KEGG: msv:Mesil_3069 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
       0.558
ADR35639.1
Regulatory protein TetR; InterPro IPR001647; KEGG: mrb:Mrub_0257 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.
       0.558
ADR35635.1
KEGG: ttj:TTHA1012 hypothetical protein; SPTR: Hypothetical conserved protein.
       0.481
ADR35636.1
KEGG: msv:Mesil_3068 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.481
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.