STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR35991.1KEGG: tth:TTC1846 hypothetical protein; SPTR: Putative uncharacterized protein. (158 aa)    
Predicted Functional Partners:
ADR35988.1
KEGG: tth:TTC1843 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR35989.1
COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831: IPR001482: IPR003593; KEGG: tth:TTC1844 putative ATPase; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Putative ATPase; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain.
       0.773
ADR35990.1
COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076: IPR003004; KEGG: tth:TTC1845 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain.
       0.773
ADR35985.1
Hypothetical protein; KEGG: rsc:RCFBP_11452 putative transcriptional regulator, LysR family; SPTR: Putative uncharacterized protein.
       0.737
ADR35986.1
InterPro IPR012902: IPR001120; KEGG: pna:Pnap_0762 general secretion pathway protein I; SPTR: General secretion pathway protein I; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.737
ADR35987.1
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: tth:TTC1842 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.737
ADR35984.1
Hypothetical protein; InterPro IPR012902: IPR000983: IPR001120; KEGG: mrb:Mrub_1036 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
       0.574
ADR35992.1
KEGG: mlo:mlr9641 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.450
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.