STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR36088.1ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: tth:TTC1043 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter. (207 aa)    
Predicted Functional Partners:
ADR36089.1
COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: msv:Mesil_0935 cytochrome c-type biogenesis protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB; PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB.
   
  0.956
ADR36383.1
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: msv:Mesil_1590 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; PFAM: ABC 3 transport family.
  
 
 0.916
ADR35649.1
Periplasmic solute binding protein; COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127: IPR006129: IPR006128; KEGG: tra:Trad_0857 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.838
ADR36093.1
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003557: IPR002541; KEGG: ttj:TTHA1406 cytochrome c-type biogenesis protein, heme exporter protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein.
  
 
  0.808
ADR36087.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR021184: IPR003834; KEGG: ttj:TTHA1409 cytochrome c-type biogenesis protein CcdA; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome C-type biogenesis protein ccdA; PFAM: Cytochrome C biogenesis protein transmembrane region.
       0.781
ADR36981.1
ABC transporter related protein; COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: msv:Mesil_2818 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
    
0.669
ADR36751.1
Amino acid ABC transporter membrane protein, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: ttj:TTHA1170 amino acid ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/o [...]
 
     0.527
aspS-2
aspartate--tRNA(Asn) ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 2 subfamily.
  
     0.520
rpsE
SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.518
argS
COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001412: IPR005148: IPR015945: IPR008909: IPR 001278; KEGG: msv:Mesil_2451 arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; arginyl tRNA synthetase domain protein; Arginyl-tRNA synthetase, class Ic, core; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase.
 
     0.497
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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