STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR36292.1Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: msv:Mesil_2265 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Surface antigen (D15); PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: outer membrane protein assembly complex, YaeT protein. (816 aa)    
Predicted Functional Partners:
ADR37673.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008266: IPR020635: IPR002290: IPR 018391: IPR017442: IPR002372: IPR000719; KEGG: msv:Mesil_0128 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Pyrrolo-quinoline quinone repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Serine/threonine protein kinase; manually curated; PFAM: Protein kinase domain; PQQ enzyme repeat.
 
 
 0.957
ADR36061.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; COGs: COG2182 Maltose-binding periplasmic protein/domains; InterPro IPR006059: IPR006060; KEGG: tth:TTC1288 maltose/maltodextrin-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Maltose/maltodextrin-binding protein; PFAM: Bacterial extracellular solute-binding protein.
    
   0.863
ADR36546.1
Membrane-associated zinc metalloprotease; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387: IPR001478: IPR008915; KEGG: ttj:TTHA0855 membrane-associated Zn-dependent protease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase M50; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.
  
  
 0.846
ADR36489.1
InterPro IPR005632; KEGG: mrb:Mrub_1290 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like).
  
  
 0.835
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
  
    0.797
ADR35786.1
S-layer domain-containing protein; InterPro IPR001119: IPR001412: IPR020845; KEGG: tth:TTC1532 S-layer protein; PFAM: S-layer domain-containing protein; SPTR: S-layer protein; PFAM: S-layer homology domain.
  
   
 0.766
ADR37379.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: mrb:Mrub_2345 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family.
 
     0.765
ADR36848.1
Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR005644: IPR004846: IPR001775; KEGG: tth:TTC1017 competence protein PilQ; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: Competence protein pilQ; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein.
  
   
 0.761
ADR36742.1
COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: msv:Mesil_1518 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3084).
  
     0.758
ADR36743.1
ABC transporter related protein; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: msv:Mesil_1517 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
  
 0.756
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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