STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR36497.1Transcriptional regulator, DeoR family; COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007630: IPR007324; KEGG: chl:Chy400_1458 transcriptional regulator, DeoR family; PFAM: sugar-binding domain-containing protein; sigma-70 region 4 domain protein; SPTR: Transcriptional regulator, DeoR family; PFAM: Sigma-70, region 4; Putative sugar-binding domain. (329 aa)    
Predicted Functional Partners:
ADR36493.1
COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: rcp:RCAP_rcc02877 monosacharide ABC transporter periplasmic monosacharide-binding protein; SPTR: Putative uncharacterized protein.
 
  
 0.689
ADR36492.1
Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485; KEGG: rcp:RCAP_rcc02884 FGGY family carbohydrate kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase, FGGY family; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
  
 0.617
ADR36496.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: rcp:RCAP_rcc02880 monosacharide ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Monosacharide ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
  
 0.484
ADR36494.1
Monosaccharide ABC transporter membrane protein, CUT2 family; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rcp:RCAP_rcc02878 monosacharide ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
  
  
 0.463
ADR36495.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rcp:RCAP_rcc02879 monosacharide ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component.
  
  
 0.463
ADR36491.1
Cupin 2 conserved barrel domain protein; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: bcz:BCZK2699 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein; PFAM: Cupin domain.
 
     0.442
ADR35825.1
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915: IPR006130: IPR013838; KEGG: nmr:Nmar_1078 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase; PFAM: DeoC/LacD family aldolase.
 
  
 0.422
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.