STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR36657.1Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: nph:NP3790A homolog 2 to S-adenosylmethionine-dependent methyltransferase 3; PFAM: Methyltransferase type 11; SPTR: S-adenosylmethionine-dependent methyltransferase 3 family protein; PFAM: Methyltransferase domain. (202 aa)    
Predicted Functional Partners:
menG
2-octaprenyl-6-methoxy-1,4-benzoquinone methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
  
 
0.919
ADR36659.1
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR020625: IPR002220; KEGG: mrb:Mrub_2327 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family; Belongs to the DapA family.
     
 0.780
ADR36658.1
KEGG: mrb:Mrub_2328 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Late embryogenesis abundant protein.
       0.773
ADR36660.1
KEGG: ttj:TTHA0738 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR36661.1
COGs: COG1760 L-serine deaminase; InterPro IPR004643: IPR005131: IPR004294: IPR002912; KEGG: ttj:TTHA0739 L-serine dehydratase, beta subunit; PFAM: serine dehydratase beta chain; Carotenoid oxygenase; amino acid-binding ACT domain protein; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase, beta subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit.
       0.559
ADR36662.1
KEGG: mrb:Mrub_2900 MarR regulatory protein; SPTR: Regulatory protein, MarR.
       0.447
ADR36663.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: tra:Trad_1172 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
       0.447
ADR36664.1
KEGG: mrb:Mrub_2902 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.447
ADR36665.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mrb:Mrub_2903 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
       0.447
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.437
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.