STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR36891.1Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: sml:Smlt2299 putative response regulator protein LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Putative response regulator protein LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family. (192 aa)    
Predicted Functional Partners:
ADR36892.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: mpo:Mpop_3827 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.966
ADR35888.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003660: IPR011712: IPR003594: IPR005467; KEGG: tra:Trad_1796 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.880
ADR37293.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR005467: IPR011712: IPR003594: IPR004358; KEGG: msv:Mesil_2703 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.876
ADR36462.1
Histidine kinase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594: IPR005467: IPR011712; KEGG: tth:TTC0158 two-component sensor; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: Probable two-component sensor; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.857
ADR36888.1
Hypothetical protein; InterPro IPR017909: IPR006311; KEGG: rpf:Rpic12D_4177 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NosL.
       0.598
ADR36889.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: ade:Adeh_2399 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
       0.598
ADR36890.1
COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006626; KEGG: gau:GAU_1382 putative nitrous oxidase accessory protein NosD; SPTR: Nitrous oxidase accessory protein-like protein; TIGRFAM: parallel beta-helix repeat (two copies).
       0.598
ADR36886.1
KEGG: sti:Sthe_0738 ABC-2 type transporter; SPTR: Putative uncharacterized protein.
       0.590
ADR36887.1
KEGG: gau:GAU_1383 putative nitrous oxidase accessory protein NosL; SPTR: Putative uncharacterized protein; PFAM: NosL; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
       0.590
ADR36893.1
COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: mrb:Mrub_0448 cell division protein FtsX; PFAM: protein of unknown function DUF214; SPTR: Cell division protein FtsX; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.556
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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