STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PullulanasePullulanase; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: ttj:TTHA1563 (neo)pullulanase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain. (479 aa)    
Predicted Functional Partners:
ADR36759.1
COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: msv:Mesil_1468 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase.
 
 0.992
ADR37565.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: dge:Dgeo_0611 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase, catalytic region; PFAM: Alpha amylase, catalytic domain.
  
  
 
0.929
ADR35968.1
COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: mrb:Mrub_2087 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; SPTR: Alpha-glucosidase; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.927
ADR36405.1
COGs: COG0058 Glucan phosphorylase; InterPro IPR011834: IPR017868: IPR000811; KEGG: msv:Mesil_2117 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
  
 0.926
ADR36064.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: mrb:Mrub_1114 alpha amylase catalytic subunit; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain.
  
  
 
0.917
ADR36065.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: mrb:Mrub_2907 alpha amylase catalytic subunit; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.916
ADR35720.1
(1->4)-alpha-D-glucan branching enzyme; COGs: COG1543 conserved hypothetical protein; InterPro IPR004300: IPR015293; KEGG: ttj:TTHA1902 hypothetical protein; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; SPTR: Putative uncharacterized protein TTHA1902; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57.
     
 0.906
ADR36061.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; COGs: COG2182 Maltose-binding periplasmic protein/domains; InterPro IPR006059: IPR006060; KEGG: tth:TTC1288 maltose/maltodextrin-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Maltose/maltodextrin-binding protein; PFAM: Bacterial extracellular solute-binding protein.
 
  
 0.789
ADR35944.1
Amino acid permease-associated region; COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841: IPR002293; KEGG: nam:NAMH_1552 cationic amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Cationic amino acid transporter; PFAM: Amino acid permease.
   
 0.701
ADR37162.1
Amino acid:proton symporter, ABT family; COGs: COG0531 Amino acid transporter; InterPro IPR004841: IPR002293; KEGG: amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Uncharacterized protein MJ0609; PFAM: Amino acid permease; TC 2.A.3.6.3.
   
 0.701
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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