STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR36951.1COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286: IPR003085; KEGG: msv:Mesil_0963 histone deacetylase; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily; PFAM: Histone deacetylase domain. (378 aa)    
Predicted Functional Partners:
ADR37665.1
Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001: IPR001650: IPR000330: IPR014021; KEGG: ava:Ava_2189 type III restriction enzyme, res subunit; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Similar to tr|Q3MB27|Q3MB27_ANAVT Type III restriction enzyme; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
   
 0.954
ADR36953.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: bts:Btus_0597 acetoin dehydrogenase AcuA; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetoin dehydrogenase AcuA; PFAM: Acetyltransferase (GNAT) family.
 
   
 0.866
ADR36952.1
COGs: COG0517 FOG: CBS domain; InterPro IPR000644: IPR002912; KEGG: ttj:TTHA0474 acetoin utilization protein AcuB (acetoin dehydrogenase); PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; SPTR: Acetoin utilization acuB protein; PFAM: CBS domain; ACT domain.
 
 
   0.815
ADR37045.1
Methyltransferase type 11; InterPro IPR013216; KEGG: mrb:Mrub_0991 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Tellurite resistance protein TehB.
    
 0.782
udk
COGs: COG0572 Uridine kinase; InterPro IPR017975: IPR000764; KEGG: dge:Dgeo_0202 uridine kinase; SPTR: Uridine kinase; TIGRFAM: uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase.
   
  0.774
ADR36954.1
COGs: COG1977 Molybdopterin converting factor small subunit; InterPro IPR003749: IPR015272: IPR010038; KEGG: ttj:TTHA0151 molybdopterin converting factor, subunit 1 (MoaD); PFAM: thiamineS protein; protein of unknown function DUF1952; SPTR: Molybdopterin converting factor, subunit 1 (MoaD); TIGRFAM: MoaD family protein; PFAM: ThiS family; Domain of unknown function (DUF1952); TIGRFAM: MoaD family protein, archaeal.
  
    0.674
ADR36955.1
KEGG: ttj:TTHA1523 hypothetical protein; SPTR: Tetrathionate reductase subunit C.
       0.668
ADR37385.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_470020 ankyrin repeat protein; PFAM: Ankyrin; SPTR: FOG: Ankyrin repeat; PFAM: Ankyrin repeat.
  
 
 0.642
ADR37386.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_309070 ankyrin repeat protein; PFAM: Ankyrin; SMART: Ankyrin; SPTR: FOG: Ankyrin repeat; PFAM: Ankyrin repeat.
  
 
 0.640
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.625
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.