STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR37373.1TrkA-N domain protein; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037: IPR006036; KEGG: ttj:TTHA1174 potassium transporter peripheral membrane component; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TRK potassium uptake system protein (TrkA); PFAM: TrkA-N domain; TrkA-C domain. (447 aa)    
Predicted Functional Partners:
ADR37374.1
Cation transporter; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ttj:TTHA1173 trk system potassium uptake protein (TrkG); PFAM: cation transporter; SPTR: Cation transporter; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family.
 
 
 0.977
rimO
SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
  
    0.740
ADR37371.1
PEGA domain protein; COGs: COG1426 conserved hypothetical protein; InterPro IPR013229; KEGG: ttj:TTHA1176 hypothetical protein; PFAM: PEGA domain protein; SPTR: Putative uncharacterized protein TTHA1176; PFAM: PEGA domain.
       0.646
psuG
Indigoidine synthase A family protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
       0.496
ADR35808.1
Molybdopterin synthase subunit MoaE;molybdopterin synthase subunit MoaD; COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003749: IPR003448; KEGG: tth:TTC1947 molybdopterin (MPT) converting factor, subunit 2; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; SPTR: Molybdopterin converting factor, subunit 1; PFAM: ThiS family; MoaE protein; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal.
   
    0.461
ADR37042.1
Uroporphyrinogen III synthase HEM4; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.403
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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