STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR37380.1Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: mrb:Mrub_2344 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family. (335 aa)    
Predicted Functional Partners:
ADR36743.1
ABC transporter related protein; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: msv:Mesil_1517 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
 
 0.989
ADR37540.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: ttj:TTHA1108 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Hypothetical conserved membrane spanning protein; PFAM: Predicted permease YjgP/YjgQ family.
  
  
  0.972
ADR37379.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495; KEGG: mrb:Mrub_2345 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family.
 
  
 
0.971
ADR37378.1
Hypothetical protein; InterPro IPR002047; KEGG: ttj:TTHA0396 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0396.
  
  
 0.806
ADR37377.1
KEGG: tth:TTC0027 hypothetical protein; SPTR: Hypothetical membrane spanning protein.
       0.773
ADR36742.1
COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: msv:Mesil_1518 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3084).
 
     0.753
ADR36292.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: msv:Mesil_2265 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Surface antigen (D15); PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
 
     0.747
ADR35719.1
KEGG: msv:Mesil_3039 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
ADR35786.1
S-layer domain-containing protein; InterPro IPR001119: IPR001412: IPR020845; KEGG: tth:TTC1532 S-layer protein; PFAM: S-layer domain-containing protein; SPTR: S-layer protein; PFAM: S-layer homology domain.
  
     0.714
ADR36761.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: tra:Trad_2382 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.654
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.