STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR37387.1KEGG: cpc:Cpar_1002 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87. (815 aa)    
Predicted Functional Partners:
ddl
D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.782
ADR37386.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_309070 ankyrin repeat protein; PFAM: Ankyrin; SMART: Ankyrin; SPTR: FOG: Ankyrin repeat; PFAM: Ankyrin repeat.
       0.599
ADR36692.1
NurA domain; COGs: COG2380 conserved hypothetical protein; InterPro IPR018977; KEGG: ttj:TTHA0521 hypothetical protein; PFAM: NurA domain; SPTR: Putative uncharacterized protein TTHA0521.
   
   0.542
ADR37385.1
Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_470020 ankyrin repeat protein; PFAM: Ankyrin; SPTR: FOG: Ankyrin repeat; PFAM: Ankyrin repeat.
       0.520
rnhA
RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
  
 0.474
ADR37161.1
Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: mrb:Mrub_2280 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24.
 
     0.464
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
       0.421
ADR35569.1
Oligoendopeptidase, pepF/M3 family; COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647: IPR001567: IPR011977; KEGG: nde:NIDE3226 putative oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; SPTR: Peptidase M3A and M3B thimet/oligopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase, pepF/M3 family.
 
     0.406
Your Current Organism:
Oceanithermus profundus
NCBI taxonomy Id: 670487
Other names: O. profundus DSM 14977, Oceanithermus profundus DSM 14977, Oceanithermus profundus str. DSM 14977, Oceanithermus profundus strain DSM 14977
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