STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP71048.1Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily. (202 aa)    
Predicted Functional Partners:
EHP70873.1
FAD/FMN-dependent dehydrogenase; PFAM: FAD binding domain.
    
 0.834
EHP71045.1
Putative transporter component; PFAM: YeeE/YedE family (DUF395).
 
     0.817
EHP71046.1
Hypothetical protein.
       0.783
EHP71047.1
Putative peroxiredoxin.
       0.783
EHP71044.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein.
  
 
  0.767
EHP70816.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
  
 0.735
EHP71043.1
PFAM: TQO small subunit DoxD.
       0.525
EHP71042.1
Hypothetical protein.
       0.518
EHP71041.1
Hypothetical protein.
       0.509
rps17
Archaeal ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
  
   0.508
Your Current Organism:
Metallosphaera yellowstonensis
NCBI taxonomy Id: 671065
Other names: M. yellowstonensis MK1, Metallosphaera sp. MK1, Metallosphaera yellowstonensis MK1, Metallosphaera yellowstonensis str. MK1, Metallosphaera yellowstonensis strain MK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.