STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP69066.1Hypothetical protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase. (258 aa)    
Predicted Functional Partners:
EHP69207.1
Pirin-related protein; PFAM: Pirin C-terminal cupin domain; Pirin; Belongs to the pirin family.
 
  
 0.669
EHP70151.1
Conserved protein of DIM6/NTAB family; PFAM: Flavin reductase like domain.
  
 
 0.622
EHP69065.1
Hypothetical protein; PFAM: DsrE/DsrF-like family.
       0.556
EHP68377.1
Glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein.
    
 0.555
EHP68412.1
UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases.
    
  0.540
EHP70229.1
Ring-hydroxylating dioxygenase, large terminal subunit; PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain.
 
  
 0.464
EHP70301.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain.
 
  
 0.462
EHP70272.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain.
 
  
 0.460
EHP70310.1
Rieske (2Fe-2S) domain-containing protein; PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain.
 
  
 0.455
EHP68128.1
PFAM: Bacterial regulatory protein, arsR family.
 
  
 0.434
Your Current Organism:
Metallosphaera yellowstonensis
NCBI taxonomy Id: 671065
Other names: M. yellowstonensis MK1, Metallosphaera sp. MK1, Metallosphaera yellowstonensis MK1, Metallosphaera yellowstonensis str. MK1, Metallosphaera yellowstonensis strain MK1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.