Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHP68568.1 | endA | MetMK1DRAFT_00030110 | MetMK1DRAFT_00023670 | Uncharacterized protein conserved in archaea; PFAM: Protein of unknown function (DUF1512). | tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.552 |
EHP68661.1 | EHP69482.1 | MetMK1DRAFT_00031040 | MetMK1DRAFT_00022450 | Putative GTPase or GTP-binding protein. | Hypothetical protein. | 0.742 |
EHP68661.1 | endA | MetMK1DRAFT_00031040 | MetMK1DRAFT_00023670 | Putative GTPase or GTP-binding protein. | tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.742 |
EHP69482.1 | EHP68661.1 | MetMK1DRAFT_00022450 | MetMK1DRAFT_00031040 | Hypothetical protein. | Putative GTPase or GTP-binding protein. | 0.742 |
EHP69482.1 | dnaG | MetMK1DRAFT_00022450 | MetMK1DRAFT_00029840 | Hypothetical protein. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. | 0.718 |
EHP69482.1 | endA | MetMK1DRAFT_00022450 | MetMK1DRAFT_00023670 | Hypothetical protein. | tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.809 |
EHP69596.1 | EHP69598.1 | MetMK1DRAFT_00023660 | MetMK1DRAFT_00023680 | Hypothetical protein. | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | 0.807 |
EHP69596.1 | EHP69599.1 | MetMK1DRAFT_00023660 | MetMK1DRAFT_00023690 | Hypothetical protein. | Hypothetical protein. | 0.728 |
EHP69596.1 | EHP69600.1 | MetMK1DRAFT_00023660 | MetMK1DRAFT_00023700 | Hypothetical protein. | Hypothetical protein. | 0.743 |
EHP69596.1 | EHP69601.1 | MetMK1DRAFT_00023660 | MetMK1DRAFT_00023710 | Hypothetical protein. | glycyl-tRNA synthetase, dimeric type; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type. | 0.729 |
EHP69596.1 | EHP69602.1 | MetMK1DRAFT_00023660 | MetMK1DRAFT_00023720 | Hypothetical protein. | Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family. | 0.503 |
EHP69596.1 | endA | MetMK1DRAFT_00023660 | MetMK1DRAFT_00023670 | Hypothetical protein. | tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.807 |
EHP69598.1 | EHP69596.1 | MetMK1DRAFT_00023680 | MetMK1DRAFT_00023660 | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | Hypothetical protein. | 0.807 |
EHP69598.1 | EHP69599.1 | MetMK1DRAFT_00023680 | MetMK1DRAFT_00023690 | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | Hypothetical protein. | 0.821 |
EHP69598.1 | EHP69600.1 | MetMK1DRAFT_00023680 | MetMK1DRAFT_00023700 | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | Hypothetical protein. | 0.823 |
EHP69598.1 | EHP69601.1 | MetMK1DRAFT_00023680 | MetMK1DRAFT_00023710 | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | glycyl-tRNA synthetase, dimeric type; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type. | 0.831 |
EHP69598.1 | EHP69602.1 | MetMK1DRAFT_00023680 | MetMK1DRAFT_00023720 | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family. | 0.602 |
EHP69598.1 | endA | MetMK1DRAFT_00023680 | MetMK1DRAFT_00023670 | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | tRNA intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.864 |
EHP69599.1 | EHP69596.1 | MetMK1DRAFT_00023690 | MetMK1DRAFT_00023660 | Hypothetical protein. | Hypothetical protein. | 0.728 |
EHP69599.1 | EHP69598.1 | MetMK1DRAFT_00023690 | MetMK1DRAFT_00023680 | Hypothetical protein. | Phosphate transport regulator related to PhoU; PFAM: Protein of unknown function DUF47. | 0.821 |
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