STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepPXaa-Pro aminopeptidase; Belongs to the peptidase M24B family. (436 aa)    
Predicted Functional Partners:
CUR35076.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.710
CUR32576.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.692
CUR35869.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.692
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.670
CUR34948.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.632
guaB
Inositol-5-monophosphate dehydrogenase.
   
   0.620
CUR35949.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.589
aroB
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
    
  0.586
Sqrdl
Sulfide:quinone oxidoreductase, mitochondrial.
    
 0.564
sqrdl
Sulfide:quinone oxidoreductase, mitochondrial.
    
 0.564
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.