STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUR31442.1Adhesin; Belongs to the bacterial solute-binding protein 9 family. (328 aa)    
Predicted Functional Partners:
CUR31440.1
Uncharacterized membrane protein in ycf23-apcF intergenic region.
 
 0.989
CUR31441.1
Putative ABC transporter ATP-binding protein in ycf23-apcF intergenic region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.989
CUR32686.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 0.975
zurA
Zinc uptake system ATP-binding protein ZurA.
 
 
 0.969
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.670
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.656
CUR32623.1
Putative cobalamin synthesis protein cobW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 0.644
CUR35250.1
Cobalamin synthesis protein P47K.
  
  
 0.644
CUR30772.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.586
cbbG
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.477
Your Current Organism:
Planktothrix tepida
NCBI taxonomy Id: 671072
Other names: Oscillatoria sp. 4d.1, Oscillatoria sp. PCC 9214, P. tepida PCC 9214, Planktothrix sp. PCC 9214, Planktothrix tepida NIES-2870, Planktothrix tepida PCC 9214
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.